Pseudomonas aeruginosa is an important opportunistic human pathogen. It encodes many virulence factors and one of them is type Ⅲ secretion system (TTSS). Effectors proteins can be delivered into host cells directly by this system,causing necrosis or apoptosis. popN gene is the first gene in the popNoperon of TTSS gene cluster. To investigate its function,popN gene deletion mutant was generated in this study,and we found this mutant can secrete effectors proteins constitutively under non-inducting condition in DMEM medium containing serum. The results indicated that PopN is a negative regulator of the TTSS expression. However,no secreted effector proteins were detectable when the popN-- mutant was grown in LB medium under non-inducting condition. To investigate the possible reasons,effects of growth status and protease (s) inhibitors on the TTSS were investigated. We present evidences that indicate protease mediated degradation of secreted effector proteins played a key role in the phenotypic inconsistency of popN- mutant.